bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0921_orf1
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0395 74.3 1e-12
> 5833.PF11_0395
Length=4226
Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query 2 SWMGIRWLIFWLNILFIFAA----LAFVLTNARDPGKKAPSEWHTADTVELSFFLTLIHH 57
S + I+W+IF+LN+LFI AA +A++ + + + W T DT+E F+L ++HH
Sbjct 3804 SLLNIKWMIFFLNLLFISAACVFSIAYLWAISETDQTTSYTIWMTNDTIEFFFYLVILHH 3863
Query 58 NTGLLFQHIIFVDALLITAS--FSSAMLVSQPTTE 90
NTG+LFQ I VD L IT S F + +V TT+
Sbjct 3864 NTGMLFQTCILVDLLFITMSLTFIATSVVKTITTD 3898
Lambda K H
0.332 0.141 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23067334887
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40