bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0924_orf1 Length=72 Score E Sequences producing significant alignments: (Bits) Value 51511.ENSCSAVP00000015062 97.1 1e-19 > 51511.ENSCSAVP00000015062 Length=526 Score = 97.1 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 0/72 (0%) Query 1 GGDFVAACVSPHAEWVLCAGEDHSLYCFANATGKLEHVMKIHDQDVIGLAHHPSNNVVVS 60 GGDFV A VSP EW+ C ED LYCF+ ++GKLE + +H++DVIG+ HHP NN++ + Sbjct 455 GGDFVCATVSPRGEWIYCVAEDKVLYCFSTSSGKLERTLTVHEKDVIGITHHPHNNLIAT 514 Query 61 WGFDGCLNVLKP 72 + DG L + KP Sbjct 515 YSEDGLLRLWKP 526 Lambda K H 0.323 0.139 0.476 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22573305356 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40