bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0993_orf1 Length=121 Score E Sequences producing significant alignments: (Bits) Value 9031.ENSGALP00000007638 71.6 7e-12 > 9031.ENSGALP00000007638 Length=328 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%) Query 1 NGRVLNPQAYSSMLADPLG--FPWPKKDPLQLLGDKLIDNKGEAVDPSSLAGKTVGIYFS 58 G+V+ + DP G FPW K +++ L+ N G+ +D S+L G VG+YFS Sbjct 35 TGKVVCRNGLLVIRDDPEGLEFPWGPKPFSEVVAGPLLRNNGQTLDSSALEGSHVGVYFS 94 Query 59 ASWCGPCRNFTPKLSETVKKLKEGGNRWR--WFSSRMTETKNHSKIISVKWIGLP 111 A WC PCR+ T L E+ +K+KE G ++ + S+ +E + W+ +P Sbjct 95 AHWCPPCRSLTRVLVESYRKIKEAGQKFEILFVSADRSEDSFKQYFSEMPWVAVP 149 Lambda K H 0.316 0.135 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22998535989 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40