bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0999_orf3 Length=366 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0069 233 1e-59 > 5833.PF08_0069 Length=877 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 133/361 (36%), Positives = 202/361 (55%), Gaps = 29/361 (8%) Query 12 ALSQQRCNVVLTAVAHGLKDP-DPQLKVAALRALYHALIFAKENFAKTEERDYIISSVLE 70 A +Q +++LTA+ + L +P + A ++ LY+ + F + NF ERD I+ +V++ Sbjct 176 AFTQPDLDLILTAIINSLCEPAEESTHCANMKVLYNLMSFIEHNFKTQVERDIIMKTVID 235 Query 71 AGNAANPSAVQVAALECIVQISQEYYSFLGAYMPAVGSVTWNALKSSDSAVVIAALEVWN 130 +VQ+AA EC++ I +YS+L AYM A+G +TW A++S + + I+A+E WN Sbjct 236 GCKDTERQSVQIAAYECLINIVSYFYSYLDAYMYAIGPLTWVAIESENERIAISAIEFWN 295 Query 131 ALAEEELAI-----IEGESTRWTLLNIMKEATPFLLPLLLEQLLNAAEDEDDDDSWTPAM 185 + EEE I EG+ NI+K+A FLLP + ++ ++ D D+WT +M Sbjct 296 TVCEEETFIDQYELQEGKKNH----NIVKQAMVFLLPKIFNAMITQESEDIDIDAWTLSM 351 Query 186 AAAICLGLCAQVVKDAILPLVINFVQLNFGSTEWRRREASVLALGCVMEGPSAEAMAPYV 245 A+A L L AQ++K+ I+ VI+FV+ NF +WRRR+A+VLA G +MEGP E + P V Sbjct 352 ASATFLALSAQLLKNDIVEPVISFVEENFIHEDWRRRDAAVLAYGSIMEGPDTEKLKPLV 411 Query 246 ARSFPILVEAVASDASVAVRDSAAWTLGKTAQQHAPIVLRHLFPPADVSSTTSPNNNGGA 305 S L E V D SVAVRD+AAWT+GK H+ I+ L N+ + Sbjct 412 EESVGQLSE-VLRDPSVAVRDTAAWTIGKITTYHSEIIYNVL----------GSYNDSNS 460 Query 306 LLLAIVERLTDQPRVAVHICWMLHELADDINTPEGRAAYQGEAATQQQDQTPLDPIFPKL 365 L ++ERL D PRVA ++CW+ ++LA R +Y + D LD F L Sbjct 461 LYGILLERLNDYPRVAANVCWVFNQLA-----VNKRTSYNKMTNSYVTD---LDDSFCVL 512 Query 366 C 366 C Sbjct 513 C 513 Lambda K H 0.317 0.131 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 141041311029 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40