bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0999_orf3
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0069 233 1e-59
> 5833.PF08_0069
Length=877
Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 202/361 (55%), Gaps = 29/361 (8%)
Query 12 ALSQQRCNVVLTAVAHGLKDP-DPQLKVAALRALYHALIFAKENFAKTEERDYIISSVLE 70
A +Q +++LTA+ + L +P + A ++ LY+ + F + NF ERD I+ +V++
Sbjct 176 AFTQPDLDLILTAIINSLCEPAEESTHCANMKVLYNLMSFIEHNFKTQVERDIIMKTVID 235
Query 71 AGNAANPSAVQVAALECIVQISQEYYSFLGAYMPAVGSVTWNALKSSDSAVVIAALEVWN 130
+VQ+AA EC++ I +YS+L AYM A+G +TW A++S + + I+A+E WN
Sbjct 236 GCKDTERQSVQIAAYECLINIVSYFYSYLDAYMYAIGPLTWVAIESENERIAISAIEFWN 295
Query 131 ALAEEELAI-----IEGESTRWTLLNIMKEATPFLLPLLLEQLLNAAEDEDDDDSWTPAM 185
+ EEE I EG+ NI+K+A FLLP + ++ ++ D D+WT +M
Sbjct 296 TVCEEETFIDQYELQEGKKNH----NIVKQAMVFLLPKIFNAMITQESEDIDIDAWTLSM 351
Query 186 AAAICLGLCAQVVKDAILPLVINFVQLNFGSTEWRRREASVLALGCVMEGPSAEAMAPYV 245
A+A L L AQ++K+ I+ VI+FV+ NF +WRRR+A+VLA G +MEGP E + P V
Sbjct 352 ASATFLALSAQLLKNDIVEPVISFVEENFIHEDWRRRDAAVLAYGSIMEGPDTEKLKPLV 411
Query 246 ARSFPILVEAVASDASVAVRDSAAWTLGKTAQQHAPIVLRHLFPPADVSSTTSPNNNGGA 305
S L E V D SVAVRD+AAWT+GK H+ I+ L N+ +
Sbjct 412 EESVGQLSE-VLRDPSVAVRDTAAWTIGKITTYHSEIIYNVL----------GSYNDSNS 460
Query 306 LLLAIVERLTDQPRVAVHICWMLHELADDINTPEGRAAYQGEAATQQQDQTPLDPIFPKL 365
L ++ERL D PRVA ++CW+ ++LA R +Y + D LD F L
Sbjct 461 LYGILLERLNDYPRVAANVCWVFNQLA-----VNKRTSYNKMTNSYVTD---LDDSFCVL 512
Query 366 C 366
C
Sbjct 513 C 513
Lambda K H
0.317 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 141041311029
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40