bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1002_orf1 Length=300 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd5_1240 82.0 2e-14 > 5807.cgd5_1240 Length=750 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 28/200 (14%) Query 54 SELLRYMDLCNCCDVLVCLFGGSCTYERSAFSRRGYKILQALKLQGLPPSVIGVGCVDPS 113 +++ +DL C D ++ LFG + ++ AF GYK+L+++KLQG ++ Sbjct 138 NKIFDTLDLIKCSDFVMALFGFNDEFQ--AFDEIGYKLLKSIKLQGQTDTI--------G 187 Query 114 VLEPADAPKGKSSASESLKFMRRFFESELGAERKFFSIGSDADWHNVLRAVGAAASLTQG 173 + ++ + + K ++ FE E KFFS+ + D N+L ++ Sbjct 188 LFFHNESHNFGNKILDCEKVFKKSFEMEFEKNMKFFSLQKENDIRNLLSSIPNMGY---- 243 Query 174 DTNTKTVAKGAEAAASRRRGHLLALSWHIAWHHVSEDPAAQPEPCLEACGLVRGAGLTCN 233 ++ RG++L+ S I ++ S + Q L G VRG GL+ N Sbjct 244 ----------SKICLREGRGYMLSESSSIVVNNYSNEEKCQ----LVIRGFVRGVGLSMN 289 Query 234 LPVHITGVGDFVLSRIETME 253 PVHIT +GDFV+ I ++ Sbjct 290 FPVHITNIGDFVIDEIRPID 309 Lambda K H 0.320 0.136 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 103813419437 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40