bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1012_orf1 Length=152 Score E Sequences producing significant alignments: (Bits) Value 3702.AT4G31850.1 66.2 2e-10 > 3702.AT4G31850.1 Length=1112 Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 4/129 (3%) Query 5 NYVLFACVASGEQQLAKRLFSRIEEAG-VADLVTYNTMLKAYSSRGELAAAEALLEKIRR 63 N L++ +G + AK++F +++ G V D VTYN M+K YS GE+ A LL ++ Sbjct 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531 Query 64 SNIEPDGVSYNLLVNAAVSCGRVDRAWFYVEEIQNHHMAPDKFTVSALVKSLQPGQDPKL 123 + EPD + N L+N RVD AW ++ + P T + L+ L G++ K Sbjct 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL--GKNGK- 588 Query 124 IRRTLQLMD 132 I+ ++L + Sbjct 589 IQEAIELFE 597 Lambda K H 0.321 0.133 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22586169780 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40