bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1022_orf1 Length=299 Score E Sequences producing significant alignments: (Bits) Value 10090.ENSMUSP00000075683 238 1e-61 > 10090.ENSMUSP00000075683 Length=493 Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 120/281 (42%), Positives = 177/281 (62%), Gaps = 4/281 (1%) Query 11 FRQEAFFQHLVGVNEPDIYAAFVLNSHELLLFIPKIPADALRFMGPSKDADFYRSRYAVT 70 FRQE+FF GV E Y +++ + LF+P++P +MG ++++ +YAV Sbjct 65 FRQESFFHWAFGVVESGCYGVIDVDTGKSTLFVPRLPDSYATWMGKIHSKEYFKEKYAVD 124 Query 71 DAIAVEAISDVEAELQRRGVRTVHVLKGVNSDSGRPVAPPKALNSFSSFTVDCSALYDIL 130 D + I+ V L R + L+GVN+DSG V + S F V+ + L+ + Sbjct 125 DVQYTDEIASV---LTSRNPSVLLTLRGVNTDSG-SVCREASFEGISKFNVNNTILHPEI 180 Query 131 VECRLRKTPLEAEYLAAACLCSSQAHCFVARNIRSGMVEGQAEAIFKAYVGFVGGARHVA 190 VECR+ KT +E E L SS+AH V + ++ GM E + E++F+ Y GG RH + Sbjct 181 VECRVFKTDMELEVLRYTNRISSEAHREVMKAVKVGMKEYEMESLFQHYCYSRGGMRHTS 240 Query 191 YDCICCAGENASILHYGHAGRPNDGSIKDNDLLLFDMGGDYNGYATDITFTYPSNGIFTE 250 Y CICC+GENA++LHYGHAG PND +IKD D+ LFDMGG+Y +A+DIT ++P+NG FTE Sbjct 241 YTCICCSGENAAVLHYGHAGAPNDRTIKDGDICLFDMGGEYYCFASDITCSFPANGKFTE 300 Query 251 TQKAIYDAVLDAQKSVIERMRPGVEWTELHRLAELVILKHL 291 QKAIY+AVL + ++V+ M+PGV W ++HRLA+ + L+ L Sbjct 301 DQKAIYEAVLRSCRTVMSTMKPGVWWPDMHRLADRIHLEEL 341 Lambda K H 0.322 0.136 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 103213341868 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40