bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1026_orf3 Length=335 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0019 434 3e-120 > 5833.PF08_0019 Length=323 Score = 434 bits (1115), Expect = 3e-120, Method: Compositional matrix adjust. Identities = 204/314 (64%), Positives = 258/314 (82%), Gaps = 2/314 (0%) Query 23 DSPLVFKGVLEG-HTDWVTAISTPT-VKSNTIISSSRDKKIIVWNLNDSPNAETVGFARR 80 ++ + +GVLEG H+DWVT++STPT K TI+S+SRDKK+IVWN+N ++ +G A++ Sbjct 7 EAEISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKK 66 Query 81 ALTGHSQCVQDVVISSDSNFALSGSWDKTLRLWDLNVGETVRTFQKHTSDVNSVAFSADN 140 +LTGHSQ + DV ISSD FALSGSWD ++RLWDL++GET+R+F HTSDV SV+FS DN Sbjct 67 SLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDN 126 Query 141 RQIVSGSRDRTVRLWNTLADCKYTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVW 200 RQIVS SRD+T++LWNTLA CKYTI + QHTDW++CVRFSPSP + +IVSCGWDKLVKVW Sbjct 127 RQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVW 186 Query 201 SLTTCKLTTNLVGHTSVLYTVTVSPDGSLCASGGKDGVAMLWDVSEGKHLYSLDASCTIN 260 +L C L NL GHT VL TVT+SPDGSLCASGGKDGVA LWDV EGKHLYSL+ TIN Sbjct 187 NLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTIN 246 Query 261 SLCFSPCNYWLCAATDKSVKIWDLENKNVLDDIHPDQPVKSGIPWCTSLNWSYDGRTLFI 320 SLCFSPC+YWLCAATD+ ++IW+LE+K ++ +I+P + K G+PWCTSL WS +G+ L+ Sbjct 247 SLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYC 306 Query 321 GTTSGNIHVYEVAE 334 G+T GNI+VYEV + Sbjct 307 GSTDGNIYVYEVKK 320 Lambda K H 0.318 0.131 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 123702018651 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40