bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1053_orf3
Length=252
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd1_880 376 3e-103
> 5807.cgd1_880
Length=405
Score = 376 bits (966), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 178/246 (72%), Positives = 213/246 (86%), Gaps = 0/246 (0%)
Query 1 VVVGTPGRVNDMLEKRHLRCEQMQLFVLDEADEMLSRGFKAQILAVFQHLPQDVQVALFS 60
+VVGTPGRV DML+K +LR + ++LF+LDEADEMLSRGFK QI +F+ LPQDVQVALFS
Sbjct 152 MVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFKKLPQDVQVALFS 211
Query 61 ATMPADILELTTQFMRKPKRILVKKDELTLEGIAQYFIDVQREENKFDTLVDLYETLTIT 120
ATMP +IL LTTQFMR PKRILVK++ELTLEGI Q+++ V+++E K DTL+DLYETLTI
Sbjct 212 ATMPNEILHLTTQFMRDPKRILVKQEELTLEGIRQFYVGVEKDEWKMDTLIDLYETLTIV 271
Query 121 QAIIYCNTRRKVLQLVEMMTGHDFTVSAMHGDMEQQQRETVLREFRSGSTRVLITTDLLA 180
QAIIYCNTRR+V QL + M DFT S+MHGDM+Q+ RE ++R+FRSGS+RVLITTDLLA
Sbjct 272 QAIIYCNTRRRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITTDLLA 331
Query 181 RGIDVQQVSLVINYDIPTSKENYIHRIGRSGRFGRKGIAINFVTAADMEQLKDIETHYNT 240
RGIDVQQVSLVINYD+P S E YIHRIGRSGRFG+KG++INFVT D+ L+DIE HYNT
Sbjct 332 RGIDVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDDIVCLRDIERHYNT 391
Query 241 QIQEMP 246
QI+EMP
Sbjct 392 QIEEMP 397
Lambda K H
0.322 0.136 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 76840603367
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40