bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1064_orf1 Length=248 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_3770 278 1e-73 > 5807.cgd8_3770 Length=434 Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 127/247 (51%), Positives = 173/247 (70%), Gaps = 8/247 (3%) Query 2 IRHLGPMIQQTQGMCASCKGQGRSIEPSKRCKTCGGKGVCKERKILQIFIEKGVKNHHKI 61 IR +GPM+QQTQ C CKG G++I +K+CK C G G KERK+L++ I+KG+ NHHK+ Sbjct 196 IRQIGPMVQQTQSPCNPCKGTGKTIPVTKQCKKCSGSGSVKERKVLEVNIDKGIPNHHKV 255 Query 62 AFRGEADERPGEIPGDVVLVVEQQEHELFKRRGNDLFMTKKITLYEALCGFKFLLTHLDG 121 F GEADE+ GEIPGDVV V+++QEH +FKR+G DLF+ K ITL EAL GFKF++THLDG Sbjct 256 TFHGEADEKQGEIPGDVVFVLDEQEHSVFKRKGGDLFIEKDITLVEALTGFKFIITHLDG 315 Query 122 RQLLIQGNPGEVVKPDSVMCVKGEGMPNHKNPFIHGELYIVFDVEFPQKVPESLHAKFRE 181 R+LL++ NPG++ KP + CV EGMP +KNPF+ G L+++ ++ FP K+ + Sbjct 316 RKLLVKSNPGDITKPSDIKCVNNEGMPTYKNPFVKGHLFVIINIIFPDKLDSKTQDLVKT 375 Query 182 ILPQPEDTPMVDEDDPKIEHHVCEGVTAEELRARQQQQRTQGSGEAYEEDEDEGHAAGAQ 241 +LP P+ VDEDDP IE H E++ R Q+ EAY+ED+++GH GA+ Sbjct 376 LLPAPK-ALNVDEDDPSIEIHYTSNTKPSEVKDRIQK-------EAYQEDDEDGHHGGAE 427 Query 242 RVQCRQQ 248 RV CRQQ Sbjct 428 RVSCRQQ 434 Lambda K H 0.319 0.138 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 74420426883 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40