bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1088_orf1
Length=146
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd6_4620 174 9e-43
> 5807.cgd6_4620
Length=135
Score = 174 bits (440), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
Query 13 SGVSASRRKARKAHFGAPSSVRRKIMTAPLCKELRKKFNVRSLPIRKDDEVMIVRGRFHD 72
+ VS+S K RK+HF S+ RR++M +PL KELR+K+NVRSLPIRK DEVM++RG HD
Sbjct 1 TDVSSSASKCRKSHFATTSTQRRELMASPLSKELRQKYNVRSLPIRKGDEVMVIRGSNHD 60
Query 73 REGKVTQVYRKKFVIHIERISREKANGESL-IGIHPSKVVITKPKLNKDRKALLARKGKA 131
EG VT+V+RKKFVI++ERI+R+K NGES+ IGIHPS VVITK KLN+DR+ LLARK ++
Sbjct 61 YEGVVTRVHRKKFVINVERITRKKTNGESVPIGIHPSNVVITKLKLNRDRRELLARKNRS 120
Query 132 ANKGKYTEKDVAQVD 146
KGKYT D A +D
Sbjct 121 TKKGKYTNADAADLD 135
Lambda K H
0.320 0.132 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22393349475
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40