bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1146_orf2 Length=204 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0316 249 3e-65 > 5833.PF14_0316 Length=1472 Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/203 (60%), Positives = 148/203 (72%), Gaps = 4/203 (1%) Query 1 YIGSTEISSQQLWVMPEGEPRMQQRVISFAPGLYKIVDEILVNAADVKARETEGGAAPRA 60 YIGS E+ +Q LWV + + RM Q+ I++ PGLYKI DEI+VNAADVKARE E P Sbjct 27 YIGSVEMHTQLLWVWNKEKNRMVQKNITYVPGLYKIFDEIIVNAADVKAREKEKSENP-- 84 Query 61 KMTAIKVNVNQAEGTIRVWNDGDGIPVAIHKEHKVYVAELIFGQLLTSDNYDDTEARVTG 120 MT IK+ +N+ I V+NDG+GIPV IHKE +YV +IFG+LLTSDNYDD E R+TG Sbjct 85 -MTCIKIEINKENKRISVYNDGEGIPVDIHKEMNIYVPHMIFGELLTSDNYDDAEDRITG 143 Query 121 GRNGFGAKLTNIFSTYFEVECADSKRNKKIKVVWTDNMSKQDPPVISPFNGTGDYVAVKF 180 GRNGFGAKLTNIFS F V+C DS R K+ K+ W+DNMSK P I +NG DYV V F Sbjct 144 GRNGFGAKLTNIFSKEFIVQCGDSSRKKEFKMTWSDNMSKFSEPHIKNYNGK-DYVKVTF 202 Query 181 KPDLRRFGITTLDDDLISLLRKR 203 KPDL +FG+T +DDD+ SLL KR Sbjct 203 KPDLNKFGMTEMDDDIESLLFKR 225 Lambda K H 0.318 0.136 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 50224503818 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40