bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1174_orf1 Length=100 Score E Sequences producing significant alignments: (Bits) Value 5141.NCU05292.1 129 2e-29 > 5141.NCU05292.1 Length=465 Score = 129 bits (325), Expect = 2e-29, Method: Composition-based stats. Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 0/100 (0%) Query 1 YVHLEINGVACKAFVDSGAQQSILSLAFAEKCSLSSLIDKRFAGLALGVGRAPIIGRVHL 60 Y+ +E+NG KA VDSGAQ +I+S AE C + L+DKR+ G+A GVG A IIGRVH Sbjct 231 YLDVEVNGAKVKALVDSGAQATIMSPDIAEACGIMRLVDKRYGGIAKGVGTAKIIGRVHT 290 Query 61 APLKLGSKFCPCSFIVLEDSKMQMLLGLDMLKRYQMVIDL 100 AP+K+GS F PCSF V+E + MLLGLDMLKRYQ IDL Sbjct 291 APVKIGSLFLPCSFTVMEGKNVDMLLGLDMLKRYQACIDL 330 Lambda K H 0.328 0.142 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23067334887 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40