bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1212_orf1 Length=248 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0272 153 6e-36 > 5833.PF13_0272 Length=208 Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 6/189 (3%) Query 62 NVQVLTDATFEQETQAVTGSTSGDWFVKFYAPWCVHCRKLAPVWEELATKLKGQINVAHL 121 +V L D+ FE TQ TG+T+G WF+KFYAPWC HC+ ++ W +LAT+LKG+INVA + Sbjct 24 DVIELNDSNFESLTQLSTGNTTGSWFIKFYAPWCSHCKAMSKTWAQLATELKGKINVAKI 83 Query 122 DATTNQQTARRFGIRGFPTLLYFKDGQMYNYSGA-RTVDDLYTFATGGWKQTTGKPIPPV 180 D T N +T +RF I GFPTLLYFK+G+MY+Y R+++ F +K P Sbjct 84 DVTLNSKTRKRFKIEGFPTLLYFKNGKMYDYKNHDRSLEAFKNFVLETYKNAKASEPPKP 143 Query 181 VSWFDLTKDEILVAFQQLRDVF-IQFPAPLLMLFAMGCIMGCVLTCLCVALCMGTKGREK 239 +++ D+ KD + FQ + ++ FP+ L +L ++ + G + + + + C G K Sbjct 144 LNYMDILKDFLNETFQNIDRIYKYAFPS-LAVLVSVSFLTGSIFSLILLKCCCMKSGASK 202 Query 240 KVVVSKKKD 248 V+KKKD Sbjct 203 ---VAKKKD 208 Lambda K H 0.325 0.136 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 74420426883 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40