bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1233_orf3 Length=363 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0695c 133 8e-30 > 5833.PFI0695c Length=418 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 19/342 (5%) Query 27 FAPFKRSDWHRLSTPKILLGAFFLAPLRFFLCVGAMALHNMCIRAVALCF--GTEEKLKK 84 +A F+R D + + G F+A + + ++L N+ + + F G + L+ Sbjct 89 YAAFERLDLINMKFMNLFYGIIFVATWKIAF-IFFLSLMNLMVSLLIYPFLKGKSDNLES 147 Query 85 DQLLRRRCLFAAISRFYCTIILRLFGVVSTRSFFWDGKERIGPDAFECKNIVSNHVSCMD 144 L + C + + +FGV + + E KNIVSNH+S +D Sbjct 148 SILFLYLKFLKLV----CRLAIWVFGVNKIENNYLCDNEW-------PKNIVSNHISAVD 196 Query 145 IMYFLSQAFTAFVCKASIFQTPLIAWPARFFGCIPVKRDSDADRHRALEDLVER-MKMNP 203 ++F+S+ +FV K S+ + ++ C+ V R+ DR ALE + ER + +N Sbjct 197 PLFFISEHACSFVAKKSLSKDRMVGPSVLALKCVLVYREKSEDRKIALESIKERQLLINA 256 Query 204 SDPACNPIVVFPEGTTTNGRCLIQFRRGAFTALQRVQPCVLIYTWGCIHPAYELIPTPYF 263 V+F EGTT+NG +I+ ++GAF +L + P +LIY + +P+Y++IP ++ Sbjct 257 KQNNYPSFVIFSEGTTSNGLQIIEQKKGAFNSLLPITPVLLIYDYDFYNPSYDIIPFTWW 316 Query 264 ISLSLSAWPASELRAYWLPPIDPPAPEGFD--SEEKRIAAFATQVRNAMWKVLKKEHFDA 321 I LS S + S LR YWLP + PP + ++E+RI F +V M+ +KK + A Sbjct 317 IFLSSSNYQGSTLRTYWLPKVYPPDKAQYPDLTDEERINIFHDEVSKIMFNHMKKYNPRA 376 Query 322 AEFSDESCPDTWDGNQTTRKQFTQLLLRGPTEAELQHEKKRS 363 + D+ + W G+ + ++ Q L L EK S Sbjct 377 PKDVDDY--NDWPGSLRFKLEYFQNALGNVATKHLNKEKNLS 416 Lambda K H 0.327 0.138 0.454 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 139255977978 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40