bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1242_orf1
Length=181
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT1G80380.2 105 7e-22
> 3702.AT1G80380.2
Length=456
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 13/174 (7%)
Query 2 LERIKERNPKILLPKYDKSKMHGAGDRTEAAVLLDATD-LDVFLLEGWMLGFRRLDPQEL 60
L ++ + K+ +P+Y+KS G GDR +++ + L V L EGWMLGF+ L +
Sbjct 288 LSKLTKEGLKMKVPRYNKSAYSGRGDRADSSTWPEVEGPLSVILFEGWMLGFKPLPADVV 347
Query 61 TATAYNLPEQEQAELRTINEALKDYERLY-SFVDLWLVLKVETANWVYNWRRQQEEDTRR 119
A +L +N+ L+ Y + ++D W+V+K++ ++VY WR Q E R+
Sbjct 348 KAV--------DPQLEVVNKNLEAYYDAWDKYIDAWVVIKIQDPSYVYRWRLQAEIAMRQ 399
Query 120 NTGSGLTADEVDGFVNRFMPLYAVYLPGLYANPPLSGKDPGGRSCLLVEVTEKR 173
+ +G++ +EV+ FV+R++P Y YLP LYA P SG DP L +++ E+R
Sbjct 400 DGQAGMSDEEVNDFVSRYLPAYKAYLPTLYAEGP-SGSDPD--RVLAIDIDEER 450
Lambda K H
0.318 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 37665090561
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40