bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1284_orf1 Length=316 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0233 436 5e-121 > 5833.PF13_0233 Length=818 Score = 436 bits (1121), Expect = 5e-121, Method: Compositional matrix adjust. Identities = 202/316 (63%), Positives = 260/316 (82%), Gaps = 0/316 (0%) Query 1 RNFLGMLDIFGFEVFKNNSLEQFFINVTNEMLQKNFVDIVFTREAKLYKEEGVSTAELVY 60 + F+GMLDIFGFEVFKNNSLEQ FIN+TNEMLQKNFVDIVF RE+KLYK+EG+STAEL Y Sbjct 462 KTFMGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTAELKY 521 Query 61 TSNADVISLLTDKKSSILSTLEDQCLAPGGGDEKFVAACKSAFKNSPKFKPAKVSPNINF 120 TSN +VI++L +K S+LS LEDQCLAPGG DEKFV++C + K + KF PAKV+ N NF Sbjct 522 TSNKEVINVLCEKGKSVLSYLEDQCLAPGGTDEKFVSSCATNLKENNKFTPAKVASNKNF 581 Query 121 LVCHTIGDIQYNAEGFLFKNKDVLRAEIMEVVQASPNPVVRDLFAGIVMEKGKIAKGQLI 180 ++ HTIG IQY AE FL KNKDVLR +++EV++ SPNP+V+ LF G V+EKGKIAKG LI Sbjct 582 IIQHTIGPIQYCAESFLLKNKDVLRGDLVEVIKDSPNPIVQQLFEGQVIEKGKIAKGSLI 641 Query 181 GSQFLRQLEALMDLINSTEPHFVRCVKPNDTKKPLDWVQSKVLIQLHALSVLEALQLRQV 240 GSQFL QL +LM+LINSTEPHF+RC+KPN+ KKPL+W + K+LIQLHALS+LEAL LRQ+ Sbjct 642 GSQFLNQLTSLMNLINSTEPHFIRCIKPNENKKPLEWCEPKILIQLHALSILEALVLRQL 701 Query 241 GFSYRRPFKDFLYQFKFIDLGICENPNLSPKEACEALLEKAKVSKSGCQVGKTMIFLKQD 300 G+SYRR F++FLYQ+KF+D+ E+ ++ + C +L+ + +S+S ++GK+M+FLKQ+ Sbjct 702 GYSYRRTFEEFLYQYKFVDIAAAEDSSVENQNKCVNILKLSGLSESMYKIGKSMVFLKQE 761 Query 301 AAKQLTLLQRQCLAAW 316 AK LT +QR+ L W Sbjct 762 GAKILTKIQREKLVEW 777 Lambda K H 0.322 0.137 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 112347727084 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40