bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_1296_orf3
Length=219
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFL0545w                                                        242    7e-63


> 5833.PFL0545w
Length=1844

 Score =  242 bits (617),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 124/209 (59%), Positives = 160/209 (76%), Gaps = 13/209 (6%)

Query  1    SITLESTSTFEDGTNVSRRGELKIVDLAGNEKAGRASEGVENAKLVLEEGKAINKSLFLL  60
            ++ LES     DGT+++++GELKIVDLAGNE+AGRA+EG+EN+K ++EEGKAINKSLF+L
Sbjct  292  TVILESNQVLNDGTSINKKGELKIVDLAGNERAGRAAEGIENSKTLMEEGKAINKSLFVL  351

Query  61   SEVISKLSKQAQQ---GEDKTKKKGEKD-VYIPWRDSKLTRLLQKALGGNSRAAVLVAVH  116
            SEVISKLSK+AQ    G++K  K+ ++D V+IPWRDSKLTR+L K+LGGN RA+V+VAVH
Sbjct  352  SEVISKLSKRAQTITAGDEKKIKRIQEDLVFIPWRDSKLTRILSKSLGGNCRASVIVAVH  411

Query  117  PSSLYLDTSFSTLRFAMKCKEIKKKVCANFFSPEQSLIAQQKKLIAMLHAQLREIS----  172
            PS  YLDTSFSTLRFA+KCK IKKK+  N+ S EQS+I QQK+LIA L  QL+ ++    
Sbjct  412  PSHFYLDTSFSTLRFALKCKTIKKKIEVNYLSAEQSVIMQQKELIAKLQNQLKHLATTKN  471

Query  173  -----EGGVTPGISSQRNAENDEQIRILK  196
                  GG     S+ R  E+DE+I  LK
Sbjct  472  VDMQLSGGGDNKYSTNRKPEDDEKILALK  500



Lambda     K      H
   0.314    0.129    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 58561024608


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40