bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1307_orf2 Length=202 Score E Sequences producing significant alignments: (Bits) Value 5207.CNF03140 89.4 6e-17 > 5207.CNF03140 Length=1484 Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 6/147 (4%) Query 42 EYAMGDKVWLSSKHLPPFTSCPKFEPRYRGPFEVIERIGTVAYRLALPPTYECHDVFHVS 101 EY +GDKVWLS++++ K + RY GP+ +I R+ + AYRL LP + HDVFHV Sbjct 1343 EYTIGDKVWLSARNIKTKRPTKKLDHRYLGPYTIIARVSSHAYRLELPKSMRIHDVFHVQ 1402 Query 102 QLVPHRPRPPALVSSAADAAWPPIHDAAGNPTAEYEVDYIMGQRGSGDAAQYLVKWRGAP 161 L + + A PI + G+ EYEV+ I+ R Q+L+KW G Sbjct 1403 LLEKYIENE---IPGRTQVAPSPI-EVEGD--LEYEVECILDHRFYRKRRQFLIKWLGYS 1456 Query 162 EDHATWEPAHHLTGCPALLRTWRRRQR 188 +H +WEP L ++ ++ R Sbjct 1457 AEHNSWEPETALENASEIVDQYKSTHR 1483 Lambda K H 0.321 0.135 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 48999515920 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40