bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1342_orf1 Length=106 Score E Sequences producing significant alignments: (Bits) Value 5518.FG07044.1 74.7 7e-13 > 5518.FG07044.1 Length=670 Score = 74.7 bits (182), Expect = 7e-13, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 5/96 (5%) Query 1 GCMHMRCY-CQHEFCWLCLGDWKQHSTRSFYRCNVYEQR-GGEAKEGSGNGDAQHSLERY 58 GC HM C C++EFCW+C+G W +H T S+Y CN YE++ G EA++ ++ SLERY Sbjct 457 GCNHMTCRKCKYEFCWMCMGLWSEHGT-SWYNCNRYEEKSGSEARDAQAK--SRTSLERY 513 Query 59 AHFFERYRAHNHGQQVAARMQLSQLKRCREVAAAAA 94 H++ RY H ++ + K+ ++ +A+ Sbjct 514 LHYYNRYANHEQSAKLDKDIAQKTEKKMVQLQSASG 549 Lambda K H 0.325 0.132 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22605445551 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40