bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1347_orf2 Length=306 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_5140 109 9e-23 > 5807.cgd6_5140 Length=469 Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 15/286 (5%) Query 20 WNLIGYKNNPKGFGVIFKTVDQTGSINPSIS-CIHNTEDNRELAKEISASSAFFYQYRNK 78 WNL+GYKN PKG GV+F +D+ NPSIS + + E +I +Y + N Sbjct 146 WNLLGYKNAPKGLGVMFSFLDRNNKKNPSISLLLSDGEKTFSSHTDIPTHLGVYYNFINS 205 Query 79 SAPVLFRVIVGNQ-GVVAQIRESVASAWVTACSLEHVHLHAH----GFIGFTANNGIGSS 133 P F++ V + G++ QIR S S W+ + + + GFIGF++ G Sbjct 206 EGPTTFKLYVSPETGIIGQIRTSPTSKWIDCFKSDAKSIPSSIKNGGFIGFSSYTG---P 262 Query 134 QAPAGNQP-TGDQVVLNFVKVWSLDHVPTQPAAPVPQHAVHPMETQPVATSPHAHSAHPE 192 + P NQP D++ + + V++LD T+ +P H T+ V + H Sbjct 263 EVP--NQPKVADRISIISLNVYNLDL--TRAGEEIPDSLKHDSNTEQVEVTDLLRDTHVH 318 Query 193 HYAIYPGATHDTSHIGFD-ASHASHADQTLMRMLTSIGNQISMLSVEVSDLRQDLRKVWG 251 A S I + + A+ +Q + R L S+ +Q+ L+ E+ ++++ L G Sbjct 319 GDKDVAEALKAFSQILYKHITEATPREQAIHRTLNSLLSQVQKLTTEIKEVQRILSINSG 378 Query 252 EEGPEAVRSIKSELTGFKDLFKRHSQQHTSALHNIHKHVETKSGSA 297 E + ++++E+ G K LF RHS+ T+ L + ++ K A Sbjct 379 TNHSETLNTVQTEIVGLKTLFDRHSKYQTNTLIGLEDTLKNKEDVA 424 Lambda K H 0.316 0.129 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 107413884851 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40