bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1391_orf1 Length=275 Score E Sequences producing significant alignments: (Bits) Value 5270.UM03299.1 272 8e-72 > 5270.UM03299.1 Length=248 Score = 272 bits (695), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 136/250 (54%), Positives = 181/250 (72%), Gaps = 3/250 (1%) Query 25 MPRTPWIGGNWKSNGTVASITELSKELNHAEFDPSQTEVVVFPTALHIGLAKEKLK-NGF 83 M RT ++GGNWK NG++ S +L++ L A+ D S EVVV P ALH+ +E+LK + Sbjct 1 MARTFFVGGNWKMNGSLESTKQLTQTLTQAKLD-SNVEVVVSPPALHLLAVQEQLKGSKV 59 Query 84 QIGCQNISKTGPGAFTGEITAGMVKDFGLKWVMVGHSERRQYYSETDSVVAEKVAMAMKE 143 + QN GAFTGE++ M+KD G+ WV++GHSERR + E+D+ VAEK A A+ E Sbjct 60 AVAAQNAYHKPSGAFTGEVSVTMLKDAGIPWVILGHSERRTLFHESDANVAEKTAAALAE 119 Query 144 EGIHVTICIGEKLEEREANKTMEVCRQQLEAVLPKVSDWRRVVIAYEPVWAIGTGKVATP 203 + V +CIGE LE+REAN+T+ V +QL+AV V DW ++V+AYEPVWAIGTGKVAT Sbjct 120 -NLSVILCIGETLEQREANETVNVVVRQLDAVADHVKDWSKIVVAYEPVWAIGTGKVATS 178 Query 204 EQAQEVHAALRKFVAEKAGEAVAEELRIVYGGSVSEQNCEALLRCTDVDGFLVGGASLKK 263 EQAQEVHAA+RK+ EK G+ A++LRI+YGGSV+ +NC+ L + D+DGFLVGGASLK Sbjct 179 EQAQEVHAAIRKWATEKLGKDTADQLRIIYGGSVAAKNCKELAQRPDIDGFLVGGASLKP 238 Query 264 AFVDIIGAPA 273 FVDI+ A A Sbjct 239 EFVDIVNANA 248 Lambda K H 0.317 0.133 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 89781565905 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40