bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1405_orf2 Length=152 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_2120 64.7 7e-10 > 5807.cgd8_2120 Length=514 Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 2/87 (2%) Query 1 AANQVLATEPKNPKALYRRAVAKSNLGELSDAKDDLMAVIAIDKANAEARKELQKIREKI 60 QVL KN KALYRR +A+ G ++K+D V+ +D +NA+A ++L+ +R+KI Sbjct 106 VTGQVLKKNSKNVKALYRRGLARLGFGMYEESKEDFQNVLKLDPSNADAHRQLKVLRQKI 165 Query 61 QAAKAEDKKAYSGLFSRASGLYDDREE 87 Q ++K +S +F GLY D+++ Sbjct 166 QEDNEKNKSGFSRMFH--GGLYSDKQQ 190 Lambda K H 0.303 0.120 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22586169780 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40