bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1415_orf5 Length=366 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1110c 325 2e-87 > 5833.PFL1110c Length=441 Score = 325 bits (833), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 162/310 (52%), Positives = 225/310 (72%), Gaps = 6/310 (1%) Query 57 LPVPSAKAQAKNRQSVSAEVYGEWNKKT-NFVAPVHPKTPEVKERIQEILDNSFLFSSLD 115 L + S K R SVSAE YG+WNKK NF+ V+ K + K +I+E L+ SFLF+ L+ Sbjct 135 LDLESIHFIQKKRLSVSAEAYGDWNKKIDNFIPKVYKKDEKEKAKIREALNESFLFNHLN 194 Query 116 VEEIDVVLNAFEEVVVKKGETLIKQGADGDKLYLIESGEADVFKEVTKEGTNEKETLKVN 175 +E ++++NAF + V+KG +I +G GD LY+I+ GE +++K TKE N+KE L V Sbjct 195 KKEFEIIVNAFFDKNVEKGVNIINEGDYGDLLYVIDQGEVEIYK--TKE-NNKKEVLTV- 250 Query 176 TMKPGDTVGELALMYNAPRAATVVAATDLKLWSLDRQTFTHIVRDAAAKKREMYEESLKE 235 +K D GELAL+YN+ RAAT A T LW+LDR++FT+I++D AKKR+MYE+ L Sbjct 251 -LKSKDVFGELALLYNSKRAATATALTKCHLWALDRESFTYIIKDMVAKKRKMYEDILSH 309 Query 236 VELLKDVDAYERSKVADALKSQLYHAGDTIIREGEAGDTFYLLLDGEAEAVKGGKVVMKY 295 V +LKD+D YER KVAD LKS+ Y+ G+ II+EGE GDTF++L+DG A A K KV+ Y Sbjct 310 VNILKDMDPYERCKVADCLKSKSYNDGEIIIKEGEEGDTFFILIDGNAVASKDNKVIKTY 369 Query 296 SRGSYFGELALLKNQPRAATVTAKTDCKVAYMDRRSFKRLLGPLEGLLMRNMDHYRAVMT 355 ++G YFGELALLKN+PRAAT+ A+ C+V Y+DR+SFKRLLGP+E +L RN+++Y+ V+ Sbjct 370 TKGDYFGELALLKNKPRAATIKAQNFCQVVYLDRKSFKRLLGPIEDILHRNVENYKKVLN 429 Query 356 QLGLDTKYLD 365 +LGLDT +D Sbjct 430 ELGLDTTCID 439 Lambda K H 0.313 0.131 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 141041311029 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40