bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1475_orf2
Length=347
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd2_4350 222 2e-56
> 5807.cgd2_4350
Length=1281
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 154/243 (63%), Gaps = 39/243 (16%)
Query 10 MARSEQRAFWMQQLRQDCDAMASPDVLLDSMLKETEMQELSNDPEELHEQLKLQRDLEKL 69
M S+Q+A WM +R+ C ND EE E++
Sbjct 1000 MPTSQQKADWMTSIRRLC-----------------------ND-EERREKI--------- 1026
Query 70 RNAPVAPLNIASYTYMMVFYESDLGILSSVLINMLSAGVAMLLVAFILIPELSAGLLVIS 129
P + +Y YMM+FYESDL IL+ NMLS G+A+ L+ +LIPEL +GL VI
Sbjct 1027 ------PFKVVAYNYMMLFYESDLSILTECFSNMLSCGIAIELITLMLIPELMSGLFVII 1080
Query 130 MICLIDLALFGFMYFWHVKLHMVSTIALVISIGFAVDYSAHMCHCFTHCLGKTRDERAIE 189
++ ID+ LFGFMY+W+VKL+MVS I L++S+GFAVDYS M H F+HC GKTR+ R IE
Sbjct 1081 LMACIDIGLFGFMYYWNVKLNMVSMINLLLSMGFAVDYSTLMTHTFSHCYGKTRNHRMIE 1140
Query 190 ALVLMGNPLFHGASSTLLGILLLGFSESFVFTVFFRMMVMVVLFGAAHGMILLPVILSWL 249
+L LMG P+ HGA ST LGI++L S S++FTVFF+MM+MVV FG HG ++LP++LS +
Sbjct 1141 SLGLMGAPVCHGAMSTFLGIVVLSGSSSYIFTVFFKMMIMVVGFGIFHGAVVLPILLSLV 1200
Query 250 GPM 252
G M
Sbjct 1201 GRM 1203
Lambda K H
0.322 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129734201706
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40