bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1517_orf1 Length=631 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0054 894 0.0 > 5833.PF08_0054 Length=677 Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/491 (86%), Positives = 460/491 (93%), Gaps = 0/491 (0%) Query 90 AVGIDLGTTYSCVGVWKNDGVEIIANDQGNRTTPSYVAFTDTERLVGDAAKNQVARNPEN 149 A+GIDLGTTYSCVGVW+N+ V+IIANDQGNRTTPSYVAFTDTERL+GDAAKNQVARNPEN Sbjct 17 AIGIDLGTTYSCVGVWRNENVDIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPEN 76 Query 150 TVFDAKRLIGRKFDDPAVQADMKHWPFTVKAGPAGKPLIEVSYQGSKKTFHPEEISAMVL 209 TVFDAKRLIGRKF + +VQ+DMKHWPFTVK+G KP+IEV+YQG KK FHPEEIS+MVL Sbjct 77 TVFDAKRLIGRKFTESSVQSDMKHWPFTVKSGVDEKPMIEVTYQGEKKLFHPEEISSMVL 136 Query 210 MKMKEIAEAFIGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 269 KMKE AEAF+GK +K AVITVPAYFNDSQRQATKDAGTIAGLNV+RIINEPTAAAIAYG Sbjct 137 QKMKENAEAFLGKSIKNAVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYG 196 Query 270 LDKKGHGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQD 329 L KKG GE N+LIFD+GGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLV+FCV+D Sbjct 197 LHKKGKGEKNILIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNFCVED 256 Query 330 FKRKNRSKDPSSNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVALSRARFE 389 FKRKNR KD S NSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSV +SRARFE Sbjct 257 FKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFE 316 Query 390 ELCMDYFRNSLVPVEKVLKDSGIDKRSVHEVVLVGGSTRIPKIQQLIQEFFNGKEPCRSI 449 ELC+DYFR++L+PVEKVLKD+ +DK+SVHEVVLVGGSTRIPKIQ LI+EFFNGKE CRSI Sbjct 317 ELCIDYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSI 376 Query 450 NPDEAVAYGAAVQAAILKGVNSSQVQDLLLLDVAPLSLGLETAGGVMTKLIERNTTIPTK 509 NPDEAVAYGAAVQAAIL G S+ VQDLLLLDV LSLGLETAGGVMTKLIERNTTIP K Sbjct 377 NPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAK 436 Query 510 KSQVFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDAN 569 KSQ+FTTYADNQPGVLIQV+EGERA+TKDNNLLGKFHLDGIPPAPR VPQIEVTFDIDAN Sbjct 437 KSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEVTFDIDAN 496 Query 570 GIMNVTATKKS 580 GI+NVTA +KS Sbjct 497 GILNVTAVEKS 507 Lambda K H 0.318 0.136 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 287784835056 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40