bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1517_orf1
Length=631
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0054 894 0.0
> 5833.PF08_0054
Length=677
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/491 (86%), Positives = 460/491 (93%), Gaps = 0/491 (0%)
Query 90 AVGIDLGTTYSCVGVWKNDGVEIIANDQGNRTTPSYVAFTDTERLVGDAAKNQVARNPEN 149
A+GIDLGTTYSCVGVW+N+ V+IIANDQGNRTTPSYVAFTDTERL+GDAAKNQVARNPEN
Sbjct 17 AIGIDLGTTYSCVGVWRNENVDIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPEN 76
Query 150 TVFDAKRLIGRKFDDPAVQADMKHWPFTVKAGPAGKPLIEVSYQGSKKTFHPEEISAMVL 209
TVFDAKRLIGRKF + +VQ+DMKHWPFTVK+G KP+IEV+YQG KK FHPEEIS+MVL
Sbjct 77 TVFDAKRLIGRKFTESSVQSDMKHWPFTVKSGVDEKPMIEVTYQGEKKLFHPEEISSMVL 136
Query 210 MKMKEIAEAFIGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 269
KMKE AEAF+GK +K AVITVPAYFNDSQRQATKDAGTIAGLNV+RIINEPTAAAIAYG
Sbjct 137 QKMKENAEAFLGKSIKNAVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYG 196
Query 270 LDKKGHGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQD 329
L KKG GE N+LIFD+GGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLV+FCV+D
Sbjct 197 LHKKGKGEKNILIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNFCVED 256
Query 330 FKRKNRSKDPSSNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVALSRARFE 389
FKRKNR KD S NSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSV +SRARFE
Sbjct 257 FKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFE 316
Query 390 ELCMDYFRNSLVPVEKVLKDSGIDKRSVHEVVLVGGSTRIPKIQQLIQEFFNGKEPCRSI 449
ELC+DYFR++L+PVEKVLKD+ +DK+SVHEVVLVGGSTRIPKIQ LI+EFFNGKE CRSI
Sbjct 317 ELCIDYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSI 376
Query 450 NPDEAVAYGAAVQAAILKGVNSSQVQDLLLLDVAPLSLGLETAGGVMTKLIERNTTIPTK 509
NPDEAVAYGAAVQAAIL G S+ VQDLLLLDV LSLGLETAGGVMTKLIERNTTIP K
Sbjct 377 NPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAK 436
Query 510 KSQVFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDAN 569
KSQ+FTTYADNQPGVLIQV+EGERA+TKDNNLLGKFHLDGIPPAPR VPQIEVTFDIDAN
Sbjct 437 KSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEVTFDIDAN 496
Query 570 GIMNVTATKKS 580
GI+NVTA +KS
Sbjct 497 GILNVTAVEKS 507
Lambda K H
0.318 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 287784835056
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40