bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1569_orf1 Length=147 Score E Sequences producing significant alignments: (Bits) Value 7227.CG10253-PA 187 7e-47 > 7227.CG10253-PA Length=631 Score = 187 bits (476), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 92/147 (62%), Positives = 109/147 (74%), Gaps = 0/147 (0%) Query 1 VGASLEERLRRHGVTLGHEPDSMEFSTVGGWVATRASGMKKNRYGNIEDMVVDVVVVTSK 60 VG LE LR G+T+GHEPDS EFST+GGWVATRASGMKKN YGNIED+VV V +VT Sbjct 236 VGQDLERVLRSEGLTVGHEPDSYEFSTLGGWVATRASGMKKNVYGNIEDLVVRVRMVTPS 295 Query 61 GSLNQQQSAPRVSSGPSLQQLMLGSEGTLGIITQVLLKVKLLPECKAYGCLAFPTFTAGV 120 G+L ++ SAPRVS GP ++LGSEGTLG+IT+V+LKV+ LP + YG LAFP F GV Sbjct 296 GTLERECSAPRVSCGPDFNHVILGSEGTLGVITEVVLKVRPLPSLRRYGSLAFPNFEQGV 355 Query 121 HFLRHVALDNLQPASIRLMDKTQTQCG 147 F+R VA QPAS+RLMD Q G Sbjct 356 LFMREVARRRCQPASVRLMDNEQFMFG 382 Lambda K H 0.318 0.133 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23033159460 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40