bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1596_orf1 Length=133 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_3790 192 2e-48 > 5807.cgd7_3790 Length=816 Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 91/133 (68%), Positives = 106/133 (79%), Gaps = 0/133 (0%) Query 1 GTIKYNAQGFIFKNKDVLRPEMVEVVQASRNSVVRALFEGVKVERGKMAKGSLIGSQFLA 60 G I+Y A GF+FKNKDVLR E+VEVVQ S N +V LF+ V VERGKMAKG LIGSQF+ Sbjct 580 GDIQYCASGFLFKNKDVLRAELVEVVQKSSNKLVADLFKDVFVERGKMAKGQLIGSQFMN 639 Query 61 QLNKLMSLIGSTESHFIRCVKPNEEKKPLLWIQSKVLIQLHALSIIEALQLRQLGYSYRR 120 L LMS++ TE HFIRCVKPNE KKPL W+ SKVLIQLH+LSI+EALQLR LG+SYRR Sbjct 640 SLGSLMSIVNETEPHFIRCVKPNESKKPLDWLASKVLIQLHSLSILEALQLRNLGFSYRR 699 Query 121 QFQEFVEQFQFID 133 F EF+ QF++ D Sbjct 700 TFSEFIYQFKYCD 712 Lambda K H 0.323 0.137 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22766716098 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40