bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1605_orf3 Length=297 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0191418 83.2 1e-14 > 44689.DDB_0191418 Length=520 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 63/303 (20%) Query 5 ENMEVESDGACAEGCE-LDEFIYDDDELMESAVASPQ---SKGLIPRYHSPESLDR---- 56 E+ +V+ D A G E LD+ YDD E Q S G + R S E L++ Sbjct 8 EDYDVDDDSAEESGNESLDDTEYDDAATQEFDFDENQPQRSLGKLTRQKSFEVLNKDDLF 67 Query 57 -RIDELIRETAALMGL-NEAFVGILLRKFDWRSDALIQEWFNDSAAVLRKGRLPPVVREQ 114 ++I+E ++ + +EA V LLR W + LI+ + + + +P V++ Sbjct 68 SESHKIIKEVKDVLSIPSEAAVSTLLRHMKWNKEKLIERYMENPEKLCIDAGVPNVMK-- 125 Query 115 DREDAPGTAECESAPAEPEASDSALKTPCTSVDVSKKEEAGDMFECPVTACVVPLTETFA 174 ++ + E++G++ C + P T+TFA Sbjct 126 -------------------------------LNATIVEKSGNV-SCLICLEDYPPTQTFA 153 Query 175 LKCSHRYSNAAWIGYLDALVTEGPQRALDARCPFPGCLELVTMDVWNRFRGPSAVARLRM 234 L C+HRY + YL+ V+EGP+ + CP P C +V D + + P R Sbjct 154 LICNHRYCLPCYKNYLEIKVSEGPE-CIYTPCPAPKCKVIVHQDAFKQIVSPEVFERFNN 212 Query 235 FAREQFVGKHLAVAWCPSPMCQQAVELVPAGVSCSDSDSFCNFSAAEVALVADVTCSCGA 294 F + +V + V WCP+P C ++ C+ + A V C CG Sbjct 213 FILKSYVDDNPQVKWCPAPGCIYSIR--------------CDRKERKEA----VNCKCGF 254 Query 295 RFC 297 ++C Sbjct 255 QYC 257 Lambda K H 0.320 0.133 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 102013186730 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40