bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1658_orf2 Length=147 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL0185c 96.3 2e-19 > 5833.PFL0185c Length=359 Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 72/102 (70%), Gaps = 0/102 (0%) Query 4 LLRSSSSKIEWAPERNVTKKVIIRKQRNKKTKETRTVTETVETNSFFNLFVDHEIPPDHK 63 LL + ++ I+W +N+ KK +++KQ NK ++E +TV +TV +SFF+ F H++P + Sbjct 192 LLHTEATVIDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFHFFTSHKVPNSNV 251 Query 64 LELMDEKEAEELQLVVEADYDIGIRIRDKIIPRAVDWFLGQV 105 ++ + + E +L++++E DY++ + I+++IIP AVD++LG + Sbjct 252 IKQLSKHEVAQLEMIIEGDYEVALTIKERIIPYAVDYYLGII 293 Lambda K H 0.311 0.132 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23033159460 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40