bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1666_orf3 Length=168 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL0805w 86.7 3e-16 > 5833.PFL0805w Length=1073 Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 3/150 (2%) Query 3 VILSGFTLSLAGGREGLLKTTFFPCRAGVPTC-SVLATRGIEKNFVWIACVDEKTPGLQD 61 VIL GF L G K +PCR G +C +VL +++ +++ACVD+ T GL+ Sbjct 914 VILFGFALMKGIGSSSANKIDIYPCRTGQNSCEAVLQNHKFKQSMIYLACVDKTTNGLEY 973 Query 62 IVNVAET--VTGVASKVTNMDGTVKVLCPESLGVAFGFAAELHTRMAKVRMKFLECTDGA 119 + ++T + V S DG + CP++ + FGF+ E HT R FL C+ Sbjct 974 LQTYSKTKNLGDVISDKYKSDGYLNFSCPQNNTLVFGFSLEFHTNFQATRNNFLNCSKYT 1033 Query 120 KGCLISGLGISESFFYRAKDTHALLGFVSC 149 C ISG+GI+ + D H+L C Sbjct 1034 NICEISGIGINTHLSFFRSDKHSLAIIALC 1063 Lambda K H 0.321 0.135 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 30377245073 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40