bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1685_orf1 Length=171 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1855w 159 3e-38 > 5833.PFL1855w Length=967 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 87/161 (54%), Positives = 113/161 (70%), Gaps = 2/161 (1%) Query 13 LGEESTDADA-SSEDSEAESSSEEEAEETAEPGKK-QTVVKDLTDQEVVCLRKTIYLCIM 70 LG + D + SSEDSEAE S + +E + D+T+Q ++ LRK +YL IM Sbjct 723 LGNDDLDENNNSSEDSEAEKSDSNDDDEDENNDSDNHEEIHDMTEQYLINLRKNVYLSIM 782 Query 71 SSLNAEECVHKILKMNIQEDLEMEVAVMLIDCCSMERTFQRFFALQAERLAKLKTAYCEC 130 SSL+ EECVHK+LK+NI++ E+E+ MLIDCC ME+TFQ+F+ALQAERL KLK Y E Sbjct 783 SSLSYEECVHKLLKLNIKKGYEIEICNMLIDCCCMEKTFQKFYALQAERLCKLKKIYQEN 842 Query 131 FQEAFKRQYALAHRLETAKLRNTAKFFAHLLMSDAIPWSVL 171 F++ F + AHRLETAKLRN +KFFAHLL +DAI WS+ Sbjct 843 FEKCFDNSFNTAHRLETAKLRNCSKFFAHLLYTDAISWSIF 883 Lambda K H 0.317 0.127 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 32237076404 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40