bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1686_orf1
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFC0166w 65.9 3e-10
> 5833.PFC0166w
Length=179
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 0/83 (0%)
Query 27 PPFETIYIPCDRSPAEFAAFACTMPWLSLPFGDYCALVRRFGIRRLPSIILITPDDHILT 86
P E IYIP DR+ E+ +F + +LPF +Y + +++ I+ LPS +LITP+++IL
Sbjct 78 PNVEIIYIPFDRTYQEYQSFLKNTNFYALPFDNYLYICKKYQIKNLPSFMLITPNNNILV 137
Query 87 SDAVPIFDDRDAAQKLHSIFQRF 109
DA + + L S+ + +
Sbjct 138 KDAAQLIKTDEYINNLKSLIKNY 160
Lambda K H
0.326 0.142 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22935578866
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40