bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1706_orf2
Length=493
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0381 214 8e-54
> 5833.PF11_0381
Length=1341
Score = 214 bits (544), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 193/373 (51%), Gaps = 16/373 (4%)
Query 14 WGMYAARCVHAWMHGEKGHKDVVVAVVDSGV-AKHYDIDSNVW-KNLEESADGKDDDGNG 71
W + R +AW G+K+V V VVDSG H D++ N++ E + D N
Sbjct 727 WNLSIIRVFNAWFLAGYGNKNVKVCVVDSGADINHVDLNGNLYIPEYNEKYEMTQDFYNF 786
Query 72 LVDDIEGWNFAENTNVIADLNGHGTHVAGTIGGVANGRDVVGCAPLVSLMKVQQFGASGR 131
+V + D +GHGTHV G IGGVAN VVG AP ++L+ ++
Sbjct 787 MVKNP------------TDASGHGTHVTGIIGGVANDLGVVGVAPNITLISLRFIDGKKY 834
Query 132 GSVSDAVRGMAYAMLKGVHVINNSWGSTESTYSLQLVIERSRHMREGLGILIVNAAGNSS 191
G A++ + +L +IN SWGS+ +L L +ER ++ G G +++ A+GN S
Sbjct 835 GGSFHAIKALNVCILNKAPIINASWGSSHFDVNLHLAVERLKYTLNGKGSVLIAASGNKS 894
Query 192 TNNDIEPFYPAAYDYQNTISVGAYDADGQLASFSNYGEASVSLLAPGDRIYSTYLDNGFT 251
+NDI P YPA + + + SV + + +++ FSNYG SV +LAPG IYST +N +
Sbjct 895 NDNDISPLYPATFTFPHVYSVASISRNFEISPFSNYGHKSVHILAPGHHIYSTIPNNSYK 954
Query 252 FLSGTSMATPHVSGIAALVFGVFMKANSEVTAAEVKDIIHATLLDLPAAKGVTQWGGAPD 311
+GTSMA PHV G++ALV+ V A EV DI+ T + + + K T +
Sbjct 955 IFTGTSMAAPHVCGVSALVYSVCYNQGFIPQAEEVLDILTRTSIKIISTKKRTINDSLVN 1014
Query 312 AMSAVLMARMGGMWFQMKCTDMIVDLQPEEVYASTIYIRGYAEGTYTAEIQVEV--YDEE 369
A AVL +GG+W QM C + +L+ + + Y +G Y +I + + D +
Sbjct 1015 AEGAVLTTLLGGLWMQMDCYFVKFNLEKGKKKHIPVVFSAYKKGVYETDIVIAIIPIDGK 1074
Query 370 ANMLGSAQIPVRL 382
+ + G IP+++
Sbjct 1075 SKIYGEIHIPIKI 1087
Lambda K H
0.315 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 212145689229
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40