bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1710_orf1 Length=161 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0233 171 6e-42 > 5833.PF13_0233 Length=818 Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 73/158 (46%), Positives = 113/158 (71%), Gaps = 0/158 (0%) Query 3 FTQDEQERSYHIFYQLCKGADKAMRDKFHLLSLDQYTYINPKCFDVPGIDDIADYNDVCA 62 TQD+ ERSYHIFYQ KGA+ M+ KF L + +Y +NP +V G+DD+ D+ +V Sbjct 278 ITQDDNERSYHIFYQFLKGANSTMKSKFGLKGVTEYKLLNPNSTEVSGVDDVKDFEEVIE 337 Query 63 AFKSMAMSEEQVEAVWSIVSGVLLLGNVKVTASKQGGIDDAAAIEGDNLTLFNQACQLLH 122 + K+M +SE +E ++SIV+G+L LGNV++ ++ G+ DAAAI +++ +FN+AC+L++ Sbjct 338 SLKNMELSESDIEVIFSIVAGILTLGNVRLIEKQEAGLSDAAAIMDEDMGVFNKACELMY 397 Query 123 IDAEAVLRELTLKVTYAGGQKVESRWKQEDGDMLKSSL 160 +D E + RE+ +KVT AGG K+E RW + D ++LKSSL Sbjct 398 LDPELIKREILIKVTVAGGTKIEGRWNKNDAEVLKSSL 435 Lambda K H 0.318 0.133 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26764363279 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40