bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1722_orf1 Length=175 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE1155c 167 1e-40 > 5833.PFE1155c Length=536 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 76/150 (50%), Positives = 107/150 (71%), Gaps = 0/150 (0%) Query 15 GKGMYTRLYLNVLNKYDWVESAMAFNTQYTDTGLFGLYMLANPNKASSAVKVMAEQFAGM 74 GKGMY+RL+LNVLN Y+++ES MAF+TQ++DTGLFGLY P+ S +K MA +F M Sbjct 380 GKGMYSRLFLNVLNSYNFIESCMAFSTQHSDTGLFGLYFTGEPSNTSDIIKAMALEFQKM 439 Query 75 TRVTAEELQRAKNSIKSSIYMNLENRGIVMEDIGRQLLMSGRVISPAEFCRAIDNVKEAD 134 RVT EEL RAK S+KS ++M+LE + I+MED+ RQ+++ R+++ + AID++ + D Sbjct 440 NRVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILNRILTGKQLSDAIDSITKED 499 Query 135 IRRVAEKMFSKPPTVVAYGDICSVPHYEEI 164 I+RV PTVV YG+I PHY+EI Sbjct 500 IQRVVHNFLKTKPTVVVYGNINYSPHYDEI 529 Lambda K H 0.318 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34716851512 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40