bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1730_orf1 Length=146 Score E Sequences producing significant alignments: (Bits) Value 5833.PFB0730w 147 9e-35 > 5833.PFB0730w Length=1997 Score = 147 bits (371), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 78/147 (53%), Positives = 95/147 (64%), Gaps = 13/147 (8%) Query 1 LQNNLTELWSLLNFLLPKIFSCAEDFEKWFSQPFEVHGMSVEGTPDGGSSGGSLLNEEEQ 60 LQNNL+ELWSLLNFLLPKIFS DFEKWF + E + EEEQ Sbjct 1044 LQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEH-----------ITEEEQ 1092 Query 61 LLVINRLHAVLRPFLLRRVKKDVLKDTPDKKEYLVHIPLTEWQRLVYKNLQDKGLSYARE 120 LL+INRLH+VL PF+LRRVKKDVLK P K EY +HI L+ +Q+++YK +Q KG Sbjct 1093 LLIINRLHSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNH 1152 Query 121 --FFSKRSLHNTLMQLRKIANHPYLFV 145 + + N +MQLRKI NHPYLF+ Sbjct 1153 NGSITTKIFQNIVMQLRKIVNHPYLFL 1179 Lambda K H 0.321 0.139 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22393349475 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40