bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1734_orf2 Length=254 Score E Sequences producing significant alignments: (Bits) Value 235279.HH0398 188 1e-46 > 235279.HH0398 Length=382 Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 93/176 (52%), Positives = 124/176 (70%), Gaps = 10/176 (5%) Query 54 GKVLKSTSSGGLAGVVAGESSICTVALGSGLNYRGYNVVDLAREATFEEVVHLLLLKELP 113 G+ +K+T GGLAG+ AG+S+ICTV G GLNYRGY++ DLARE FEEV +LLL ++LP Sbjct 2 GETIKNTKVGGLAGITAGQSAICTVGTGHGLNYRGYDIYDLARECEFEEVAYLLLKEKLP 61 Query 114 TQKQLSDLKQKLYKARQLPVQLLTVLKQIPKDAHAMDVLRTACSVLGSLEPERN------ 167 +L+ K++L AR LP L LK +PK+AH MD++RT CS+LG LEPE Sbjct 62 NANELAAFKKELIAARDLPKALKDTLKLLPKNAHPMDIMRTTCSMLGCLEPETYDIVKMS 121 Query 168 -PTQQQVDIALRLIGCLPGALSYWFHYTNSGKEISFQSDPEDSVATNFLKLLHGDP 222 P Q Q IA+RL+G P AL++W HY ++GKEIS QS+ +DS+A +FL+LLH P Sbjct 122 FPMQNQ--IAIRLLGIFPSALTFWHHYHHNGKEISTQSN-QDSIAGHFLELLHQKP 174 Lambda K H 0.317 0.131 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 78050691609 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40