bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1769_orf2 Length=115 Score E Sequences producing significant alignments: (Bits) Value 10141.ENSCPOP00000002483 87.8 9e-17 > 10141.ENSCPOP00000002483 Length=698 Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 5/107 (4%) Query 5 LVAIVVPDQEQTLRWLREVRGADVADSRPFEEWVKDSAVQKAVYDDMQQVGKMQGLKGFE 64 L+AIVVPD E W R+ RG + + FEE ++ V+KA+ +DM ++GK GLK FE Sbjct 597 LIAIVVPDAESLASWARK-RGFEGS----FEELCRNKDVKKAILEDMVRIGKDSGLKSFE 651 Query 65 LARKIHLHSEQFTVENGLLTPTFKLKRHYAQEVFCEEIKTMYGEIHM 111 R I LH E F+V+NGLLTPT K KR + F +I +Y I + Sbjct 652 QVRGIALHPELFSVDNGLLTPTMKAKRPELRNYFRSQIDELYSTIKV 698 Lambda K H 0.318 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22698934816 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40