bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1806_orf3 Length=154 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd4_240 192 4e-48 > 5807.cgd4_240 Length=433 Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 86/141 (60%), Positives = 111/141 (78%), Gaps = 8/141 (5%) Query 12 AVAYICSRFYRAPELMLGANEYTTAIDIWSLGCVLGELLLGRPLFAGETSVDQLVKIIQI 71 +VAYICSRFYRAPELMLGA EYT +ID+WS+GCV GEL+LG+PLF+GETS+DQLV+IIQI Sbjct 248 SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 307 Query 72 LGTPTQGQMSAMNPNYDEFKFPDVEARDWHSVFAAHQCANDGDKSFEQAVDLMSKLLRYE 131 +GTPT+ QM MNP+Y E +FP ++A+DW + +G S A+DL+ ++LRYE Sbjct 308 MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP------EGTPSL--AIDLLEQILRYE 359 Query 132 PNQRLQPLEALAHEFFDELRN 152 P+ R+ P EA+AH FFD LRN Sbjct 360 PDLRINPYEAMAHPFFDHLRN 380 Lambda K H 0.321 0.136 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23121682173 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40