bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1814_orf1 Length=362 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0124 138 3e-31 > 5833.PF08_0124 Length=802 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/320 (31%), Positives = 156/320 (48%), Gaps = 48/320 (15%) Query 52 VTVQELRAERKKLLSEHFGYSNDNNPFGDRLLAEPFVWKKKNLLLQAAG-KKHATTVNAL 110 +TV+EL+ ER+ L+ +HF Y+++ NPFGD L+ PFVWK KN + KK T N+L Sbjct 200 MTVKELKKERENLMKKHFNYTDECNPFGDNTLSTPFVWKLKNKYEKIKNHKKIKLTTNSL 259 Query 111 LTTSVSKVQEIKSVKKRREEREAEEQLMQAQREELQREKEREHFQDYFEKEEVFLRQMHM 170 L VSK+ EI+ VKKRRE+RE E+QL++ R + +++K + + ++Y EKE +F + Sbjct 260 LENCVSKINEIEQVKKRREDREKEKQLIEDHRLQFEKQKNQINIKEYMEKEHLFFFNQEI 319 Query 171 KKTEIRAEQNREQPIDFIVKGLRMLNGERFEKVSV----LPVPPHEVFDCFNK--EPMTV 224 + R + QPID ++++ GE + SV +P FNK E + Sbjct 320 HFSNKRIKHKDIQPIDIFRTAIQIMKGEEDVQKSVGINNYTMP-------FNKILEGLRE 372 Query 225 QMIEEMLSDVKLHIGVDTTAVDKDYQDFWQALLVLTKDALERAERKQKVLEELRNNSSAD 284 + + +KL D ++ Y+ FW ALL K L++ E K K NN D Sbjct 373 KELVNCERQIKLFQMHDKMFYEEKYEKFWNALLFFCKYYLDKIELKGK-----ENNYIDD 427 Query 285 AAAQAAAILANNTSVGDVRDADSGIAVGVTSDITAILSGKSPEELDALKEGIKLKLETEE 344 NT + I + K+ +EL + IK K+ EE Sbjct 428 -----------NTDIK----------------IESFFLNKTYDELVKYEYKIKEKILMEE 460 Query 345 --DVDTAYWESILQKVPLFR 362 D D YW IL K+P ++ Sbjct 461 STDNDVNYWNMILCKIPYYK 480 Lambda K H 0.312 0.128 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 138660866961 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40