bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1820_orf1
Length=250
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd3_730 102 2e-20
> 5807.cgd3_730
Length=419
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 86/134 (64%), Gaps = 4/134 (2%)
Query 1 FGHSLGGAVAIDLASRRGDEISGVVVENTFTSLRGALHDVLPFTKGVTWILNMIQRIKLA 60
+GHS+GGAVAIDLAS+ ++GV++ENTFT+++ V P K + IQR+K
Sbjct 241 YGHSIGGAVAIDLASKYN--VTGVILENTFTNIKSVAFRVYPIFKYFGFFFKFIQRLKFD 298
Query 61 SIDKVRSLKVPILFTSGTDDELIPSSHSEKLYEECGA-KTKWRIE-VRRGTHNNTYGVGG 118
S+ K+ +K PILF G +DE+IP +HS +LY + G+ K+ +I V G+HN+T+ GG
Sbjct 299 SVSKISRVKSPILFVVGNEDEIIPPTHSVELYMKAGSPKSLKKIYLVSGGSHNDTWIKGG 358
Query 119 EKYAAFIREFMETA 132
++ + +F+ A
Sbjct 359 MEFYLMLLQFIYNA 372
Lambda K H
0.310 0.124 0.331
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 75630515125
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40