bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1820_orf1 Length=250 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_730 102 2e-20 > 5807.cgd3_730 Length=419 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 86/134 (64%), Gaps = 4/134 (2%) Query 1 FGHSLGGAVAIDLASRRGDEISGVVVENTFTSLRGALHDVLPFTKGVTWILNMIQRIKLA 60 +GHS+GGAVAIDLAS+ ++GV++ENTFT+++ V P K + IQR+K Sbjct 241 YGHSIGGAVAIDLASKYN--VTGVILENTFTNIKSVAFRVYPIFKYFGFFFKFIQRLKFD 298 Query 61 SIDKVRSLKVPILFTSGTDDELIPSSHSEKLYEECGA-KTKWRIE-VRRGTHNNTYGVGG 118 S+ K+ +K PILF G +DE+IP +HS +LY + G+ K+ +I V G+HN+T+ GG Sbjct 299 SVSKISRVKSPILFVVGNEDEIIPPTHSVELYMKAGSPKSLKKIYLVSGGSHNDTWIKGG 358 Query 119 EKYAAFIREFMETA 132 ++ + +F+ A Sbjct 359 MEFYLMLLQFIYNA 372 Lambda K H 0.310 0.124 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 75630515125 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40