bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1834_orf5
Length=267
Score E
Sequences producing significant alignments: (Bits) Value
370438.PTH_2122 163 4e-39
> 370438.PTH_2122
Length=871
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 161/271 (59%), Gaps = 26/271 (9%)
Query 5 ISRAVIEKCQGDYDFIRHSVRDFIVGLPRSSVPINLGESGPSVA--LRNALRKAWKMAE- 61
I R V++K + D + ++ V+ + LPR G G V+ L + AWK AE
Sbjct 45 IVRPVLQKLEVDVNKLKAQVQAAVERLPRVH-----GAGGVYVSQELSRIIDLAWKEAER 99
Query 62 FEGAPIGVQHLYLALVEILAFQ--KIMVKSGCDL-RLFKHEIVEQFKGRQRGVAPTSFQE 118
F+ + +H+ L +V + + +I+ SG RL++ + + +G QR
Sbjct 100 FKDEYLSTEHILLGMVGLREGEAGRILRSSGVTQDRLYR--ALAEIRGSQR--------- 148
Query 119 MVGDKQGTSDAF--VSQYGVDLSFMAQQGLLPPVVGRDEEIDRIAQILSRKMTKVPMLVG 176
V D Q D + ++++ DL+ +A++G L PV+GRDEEI R+ Q+LSR+ P+L+G
Sbjct 149 -VTD-QNPEDKYQALARFTRDLTELARKGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIG 206
Query 177 EPGVGKTAVIEGLAQRIVEGAVPESLRKRRIFALDLLSLSAGSAMRGEFEKRMKEVVSYL 236
EPGVGKTA++EGLAQRI+ G VPESL+ +R+ +LD+ +L AGS RGEFE RMK V+ +
Sbjct 207 EPGVGKTAIVEGLAQRIMSGDVPESLKNKRLLSLDMGALIAGSKYRGEFEDRMKAVLKEI 266
Query 237 QNNVEEVILFVDEIHTLIGAAGGVCRNDRAN 267
+ E++LF+DE+HTL+GA D AN
Sbjct 267 NDAHGEIVLFIDELHTLVGAGAAEGAVDAAN 297
Lambda K H
0.321 0.138 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 84961079145
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40