bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1834_orf5 Length=267 Score E Sequences producing significant alignments: (Bits) Value 370438.PTH_2122 163 4e-39 > 370438.PTH_2122 Length=871 Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 105/271 (38%), Positives = 161/271 (59%), Gaps = 26/271 (9%) Query 5 ISRAVIEKCQGDYDFIRHSVRDFIVGLPRSSVPINLGESGPSVA--LRNALRKAWKMAE- 61 I R V++K + D + ++ V+ + LPR G G V+ L + AWK AE Sbjct 45 IVRPVLQKLEVDVNKLKAQVQAAVERLPRVH-----GAGGVYVSQELSRIIDLAWKEAER 99 Query 62 FEGAPIGVQHLYLALVEILAFQ--KIMVKSGCDL-RLFKHEIVEQFKGRQRGVAPTSFQE 118 F+ + +H+ L +V + + +I+ SG RL++ + + +G QR Sbjct 100 FKDEYLSTEHILLGMVGLREGEAGRILRSSGVTQDRLYR--ALAEIRGSQR--------- 148 Query 119 MVGDKQGTSDAF--VSQYGVDLSFMAQQGLLPPVVGRDEEIDRIAQILSRKMTKVPMLVG 176 V D Q D + ++++ DL+ +A++G L PV+GRDEEI R+ Q+LSR+ P+L+G Sbjct 149 -VTD-QNPEDKYQALARFTRDLTELARKGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIG 206 Query 177 EPGVGKTAVIEGLAQRIVEGAVPESLRKRRIFALDLLSLSAGSAMRGEFEKRMKEVVSYL 236 EPGVGKTA++EGLAQRI+ G VPESL+ +R+ +LD+ +L AGS RGEFE RMK V+ + Sbjct 207 EPGVGKTAIVEGLAQRIMSGDVPESLKNKRLLSLDMGALIAGSKYRGEFEDRMKAVLKEI 266 Query 237 QNNVEEVILFVDEIHTLIGAAGGVCRNDRAN 267 + E++LF+DE+HTL+GA D AN Sbjct 267 NDAHGEIVLFIDELHTLVGAGAAEGAVDAAN 297 Lambda K H 0.321 0.138 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 84961079145 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40