bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1857_orf1 Length=287 Score E Sequences producing significant alignments: (Bits) Value 5141.NCU00461.1 149 9e-35 > 5141.NCU00461.1 Length=1050 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query 1 PAASTDELPNPQLSQEQRIDHLLTDLRILFTMPKTKFTNLARERLLTVQETAYALCACQF 60 PAA+ D +P L EQ I + ++ +L+ +P+ KF N+ L++QET YA C F Sbjct 317 PAANIDG-KHPPL--EQSIHQITKEISLLYCLPQNKFHNMFASGELSLQETIYAHCVWVF 373 Query 61 ALHFSATVGSSFPRIEKLVKQFGGKSLTMQEVY-ELRTRLKVCPFTEDLIYKVVKENPQM 119 HF +G+ + L+ K+ + E+ +++ RL+ FT D I +++ +PQ+ Sbjct 374 VQHFLNRLGTEY---TSLIAALDPKNNSHVEILSKMKKRLRTETFTPDYILEIISSHPQL 430 Query 120 LKLLYKEFESLHNPRVA----RRCAAPSSAAAAAAAAAAAAAASPLRGLVAQLDAFEAVP 175 ++ LY F S+H RV R AP+ + A + + Sbjct 431 VRALYASFASVH-LRVGSDYDRHLIAPTPVMEVLSDARLKEK------ITKDVSNEHEEM 483 Query 176 VFMKFLEFNFSTLKTNFFVPAKCGFGFRLCGEFLPKEDFENKPFSVVFHLAAAALGLHVR 235 V F FN + LKTNFF P K FRL FLP+ ++ + + + + + G H+R Sbjct 484 VMTAFRVFNNAVLKTNFFTPTKVALSFRLNPSFLPEVEYPKPLYGMFLVITSESRGFHLR 543 Query 236 CSEVARGGLRLVRSVGFGVYVQNARALVDEVFRLAFTQHFKNKDLSEGGSKG 287 ++ARGG+R+V+S Y NAR L DE + LA TQ KNKD+ EGGSKG Sbjct 544 FKDIARGGIRIVKSRSKEAYQINARNLFDENYGLASTQQRKNKDIPEGGSKG 595 Lambda K H 0.324 0.136 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 96012411040 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40