bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_1935_orf3
Length=130
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5141.NCU09995.1                                                     89.7    2e-17


> 5141.NCU09995.1
Length=103

 Score = 89.7 bits (221),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 64/93 (68%), Gaps = 3/93 (3%)

Query  33   PKKAAKAAKPTK--RTRAKKDPDAPKRGTPAYIFFMKDKREEICKKNPNVKSATQIAALV  90
            PK AAK+    K  + RAKKDP+APKRG  AY+FF  ++RE + ++NP V S  Q+  ++
Sbjct  2    PKAAAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKIL  60

Query  91   GEEWKKLSPSQKAPYEKKAEADKQRYQKEVAAY  123
            GE WK LS  Q+APYE KA ADK+RY+ E  AY
Sbjct  61   GERWKALSDKQRAPYEAKAAADKKRYEDEKQAY  93



Lambda     K      H
   0.311    0.126    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 23020010250


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40