bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1975_orf4
Length=181
Score E
Sequences producing significant alignments: (Bits) Value
44689.DDBDRAFT_0204917 82.4 6e-15
> 44689.DDBDRAFT_0204917
Length=150
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query 75 MTLEALKSCDG-EKSEKLFVAVKGLVFDVSVNGKTFYGKNGSYHIFAGKDATVALARMSF 133
+LE +K G ++++ +F+A+KG ++DV+ K+ YG GSYH+FAG DATV LA+ SF
Sbjct 48 YSLEEIKDFKGIDETKPIFIAIKGKIYDVTAK-KSTYGPGGSYHLFAGNDATVCLAKSSF 106
Query 134 DEKLLNSPPS--TWESLTESEKESLQSWLQRFKSKYSLVAVV 173
+E +N P + + + LT +K+SL++W+ F +Y+LV V
Sbjct 107 EESDINQPWTNQSLDDLTADQKDSLKNWIDFFSERYTLVGNV 148
Lambda K H
0.313 0.126 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 37665090561
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40