bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2046_orf1 Length=206 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL0410w 93.2 4e-18 > 5833.PFL0410w Length=3525 Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 8/154 (5%) Query 45 WAMRTVEKIQDMRCLGLFHYISPSGATRSQKILRFFGDLVPAFMIIWFWNLPFLVIECTQ 104 W + I ++R LGLF YI P K+ R DL ++II + PF++I + Sbjct 2597 WTSICLSNIYNIRALGLFRYIHPYNINIWDKMKRILSDLSCVYIIILYIYFPFIIINLLE 2656 Query 105 LLGCVSISYKNEPSLFVLTALPEQVCSLDEPWFLAGAVVGASGILVWGISSVIVFCVWML 164 L+ C I YK PSL +L +P QVC L FL+G + ++++ +I+F +++ Sbjct 2657 LVWCQPIQYKENPSLLILYHMPSQVCDLQNKLFLSGVLYSCFFLIIY----IILFSIYIY 2712 Query 165 YTDNADKLEARY----RYGFLSNGYEFQYRAWEM 194 T + K Y + FL NG+ +Q R WE+ Sbjct 2713 DTSKSIKAIGSYSNNLKSYFLFNGHNYQNRCWEI 2746 Lambda K H 0.330 0.141 0.465 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 51449491716 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40