bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2048_orf2
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
28985.KLLA0D18348g 126 3e-28
> 28985.KLLA0D18348g
Length=235
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Query 47 MRLFQKEHVFHNDWDTITSAFWVKYPNELQPHVLRVDTLDLLLDTEQQQFSCRRLLSLKY 106
MRLF +HVF WD IT+A W KYPNE+ HV+ VD L LD + + RL++ K
Sbjct 1 MRLFHNQHVFDYSWDYITAANWKKYPNEVSTHVVAVDVLRRELDISGKVLTSERLITCKQ 60
Query 107 QCPKWVQKFFGASPVGYAFEQATCSLKDKKLTLKSCNFTFASFFRVEETCEYLPHPENPQ 166
P+WV G S + Y E + L +K L L+SCN T +S +V ET +Y+PHP++PQ
Sbjct 61 SVPQWVMMLVGGSNISYVREVSVVDLNEKSLILRSCNLTGSSLLKVYETVKYMPHPDDPQ 120
Query 167 -QTLYRQKA 174
+TL++Q+A
Sbjct 121 NRTLFKQEA 129
Lambda K H
0.325 0.134 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 37047630060
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40