bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2048_orf2 Length=180 Score E Sequences producing significant alignments: (Bits) Value 28985.KLLA0D18348g 126 3e-28 > 28985.KLLA0D18348g Length=235 Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 1/129 (0%) Query 47 MRLFQKEHVFHNDWDTITSAFWVKYPNELQPHVLRVDTLDLLLDTEQQQFSCRRLLSLKY 106 MRLF +HVF WD IT+A W KYPNE+ HV+ VD L LD + + RL++ K Sbjct 1 MRLFHNQHVFDYSWDYITAANWKKYPNEVSTHVVAVDVLRRELDISGKVLTSERLITCKQ 60 Query 107 QCPKWVQKFFGASPVGYAFEQATCSLKDKKLTLKSCNFTFASFFRVEETCEYLPHPENPQ 166 P+WV G S + Y E + L +K L L+SCN T +S +V ET +Y+PHP++PQ Sbjct 61 SVPQWVMMLVGGSNISYVREVSVVDLNEKSLILRSCNLTGSSLLKVYETVKYMPHPDDPQ 120 Query 167 -QTLYRQKA 174 +TL++Q+A Sbjct 121 NRTLFKQEA 129 Lambda K H 0.325 0.134 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 37047630060 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40