bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2075_orf3 Length=226 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0070 165 1e-39 > 5833.PF14_0070 Length=690 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 77/122 (63%), Positives = 98/122 (80%), Gaps = 0/122 (0%) Query 105 QRKNMVQMTDSTTYNVNQLLRGNIMSSEYFKSLHQFKSFNEVVDELAAFADHAEPYCSGS 164 ++KN ++MT++TTYNVN LLR NI+SSEYFKSL K+F EVVDE+ ++ADH EPYC GS Sbjct 168 EKKNCLEMTNTTTYNVNTLLRNNILSSEYFKSLIPIKTFKEVVDEIHSYADHVEPYCIGS 227 Query 165 TRAPSTLFCCLYKLFTLKLTEKQMHMLLNHRESPYVRCTGFLYLRYVHPADQLWKWYEPY 224 RAPSTLFCCLYK FT++L+EKQ+ L+ +++S Y+R GFLYLRYVH LW W+EPY Sbjct 228 NRAPSTLFCCLYKFFTMQLSEKQLKSLIENKDSCYIRACGFLYLRYVHSPANLWMWFEPY 287 Query 225 FL 226 L Sbjct 288 LL 289 Lambda K H 0.321 0.129 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 61967794494 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40