bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2092_orf3 Length=542 Score E Sequences producing significant alignments: (Bits) Value 159087.Daro_3922 78.2 6e-13 > 159087.Daro_3922 Length=481 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 84/314 (26%), Positives = 126/314 (40%), Gaps = 88/314 (28%) Query 66 GFLQSPSAAAPAAAAAR-KWDYQQQGA--DWGN------VVAAGMSLKRQSPIEVDAAAL 116 G++ + + PAA A+ W Y GA +W N V A G +RQSPI++ Sbjct 242 GYMLELTHSEPAAQHAQIHWAYDGAGAPENWPNLDPKNKVCAIG---ERQSPIDI----- 293 Query 117 QRLVDHCCSSSSSGSAAAAEEVAATGNLLKVAPAEMRLGNELAAAAAAAAKQVVFDWGLK 176 G E + K P+ R + D G Sbjct 294 -----------KDGIKVDLEPIK-----FKYQPSTFR----------------IVDNGHT 321 Query 177 LQLKPAAAGDFGSLAAAANKYEVQQFHFHAPAEHTLGG-RSSIELHVVCKCTDTAAAAAA 235 +Q++ GD GS++ YE+ QFHFH P+E + G R + +H+V K D A Sbjct 322 VQVE---VGD-GSISLTGKTYELVQFHFHRPSEEKVNGQRFDMVVHLVHKSDDGQLA--- 374 Query 236 ANQNLVLGIFFEAKEGAADNPFLLCCERALAEQQQQQEQQEVPAAVREALQQAAAAAAAD 295 V+ + E +NPF+ Q +P L++ A A Sbjct 375 -----VVAVLLER---GTENPFI------------QTLWNNMP------LEKNMAVAPP- 407 Query 296 DSSKDTVNLKELIDEDKILVTYEGSLTTPPCTENVLWYLRREAIPTSPEQAKRFS-LYLK 354 T++L L+ + TY GSLTTPPC+E VLW + ++ + S +Q FS LY Sbjct 408 ---TTTIDLNTLLPATRNYYTYMGSLTTPPCSEGVLWLVMKQPVQVSQDQINIFSRLYKN 464 Query 355 RCEEAEDAGGLLEK 368 + +GG L K Sbjct 465 NARPIQPSGGRLIK 478 Lambda K H 0.315 0.127 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 239337766417 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40